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全部话题 - 话题: dssp
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f***x
发帖数: 1524
1
去了DSSP网站,有prebuild binary for windows,下载后,用command line 可以顺利
运行。
但是无法嵌入到biopython.
求助该如何安装,可以直接在biopython控制DSSP,产生object.
谢谢。
n******7
发帖数: 12463
2
单独跑DSSP
然后用python parse结果
C*******e
发帖数: 4348
3
来自主题: Biology版 - 在线等:Jalview求助
有没有人用Jalview啊
如果说Multiple Sequence Alignment里的某个seq的结构已知
能不能把基于结构的secondary structure assignments(DSSP)也显示在alignment下
方啊?
google了半天,也看manual半天
没有找到该怎么做。。。。
用DAS settings也没找到DSSP
m****n
发帖数: 354
4
来自主题: JobHunting版 - interview in small biotech company
I want to make a point after reading DSSP's thread about interview in small
biotech. Maybe these are all individual cases. But still, you can sure come
to some kinda conclusions.
A senior HR in Progenics found my resume on monster.com and then had me talk
to the HM. Then a on-site interview was arranged. Because the interview
started early in the morning, I want to stay in Tarrytwon, NY the night
before so I can beat traffic and don't have to get up around 5:30am (I have
to get up around 5:30 in
n******7
发帖数: 12463
5
来自主题: Biology版 - 请问:关于蛋白质二级结构
DSSP
既是软件又是数据库
f**********e
发帖数: 1994
6
来自主题: Biology版 - 请问:关于蛋白质二级结构
psipred 是目前较好的预测法
dssp 在 rasmol 有内建
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