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全部话题 - 话题: serine
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i*********0
发帖数: 915
1
一般都没事,我做的一个gene就是t变成了s,不过很保守,都是sq/tq domain。
h**********8
发帖数: 650
2
不好说, 我做的一个蛋白, 某位点也是这样突变。
问题是, 这个位点报道可以磷酸化, 不知道如此突变会影响磷酸化效率么。
w******n
发帖数: 767
3
fix it,不然以后说不清楚。
l**********1
发帖数: 5204
4
Agree
otherwise next setp likes
Site-directed mutagenesis etc
who believe?
M*****n
发帖数: 16729
5
看看是不是SNP.
表以为别的species是S, 你这儿就没有SNP。
S变成T的SNP是常见的。
现在Genome测得多了,所谓的wildtype是相对的,没有绝对的wildtype.
所谓的reference 其实是most common variant,不是绝对的wild type.
s******s
发帖数: 13035
6
重新克隆呗,能费啥事?也说不定ref是错的,经常的事情
s********8
发帖数: 619
7
又测序了一个克隆,目前为止没有突变.看来还是polymerase的问题.
问题是这个基因有2.5kb,还得接着测,但愿没突变了.
h******y
发帖数: 55
8
把突变那个和没突变的做个比较就知道要不要紧了啊。
没突变那个是不能省的,要不就说不清。
多设计几个引物,多挑几个克隆,一次全测了,不要挤牙膏啊。
s********8
发帖数: 619
9
一次全测?我比较小农,我一般一次只测一个克隆, 序列没问题再接着往下测,帮老板省
钱啊...
l**********1
发帖数: 5204
10
fi you Boss need to save money (for avoiding at least five positive clones plus two control clones for
one time outside sequencing)
is equal wasting your time or lowering your work accuracy/integrality's amplitude,
then You should Move on to next PI ASAP. That is better for you
even you are 凤凰N,
but this field was and is and future is also 烧钱的领域 只适合贵族干 不适合凤凰PI his/her Lab.
s******s
发帖数: 13035
11
一个测序也就三四刀,你一天工资要100刀了吧?一天浪费的试剂更多了吧?
浪费时间在等测序上,其实不是给老板省钱
s********8
发帖数: 619
12
大家对我一次测一个克隆这么有意见啊,呵呵,我等测序的时候还干别的有很多事啊,不
适只做这一个实验呀.不过已经拿到了测序结果了,克隆没问题可以接着往下做了:)
其实同时还做了一个5k的,主要是测这个耽误了两天.
o********r
发帖数: 775
13

同学,现在实验时间往往比钱更重要,如果你做的是热门课题,至少有3个顶级实验室
同时在做这个,你只要晚一点就被scoop。
我们做实验验证的时候,同一个PCR基本用3种酶同时扩增,有一次(第一次测序失败)
同时用了3种酶,两侧各3个引物,27个PCR,54个测序一起做。
s********8
发帖数: 619
14
学习了...看来我是比较低效率:)
y*******a
发帖数: 303
15
如题,已知一个基因的信息,prediction是Serine/threonine-protein kinase,但不
知道substrate,怎样从实验的角度证明是protein kinase?
y*******a
发帖数: 303
16
如题,已知一个基因的信息,prediction是Serine/threonine-protein kinase,但不
知道substrate,怎样从实验的角度证明是protein kinase?
l**********1
发帖数: 5204
17
try
//creativebiomart.net/description_54358_27.htm
Cat.No.
CABT-30124HM
Product Overview
Hamster monoclonal antibody to Mouse IGF1.
Antigen Description
The protein encoded by this gene is identical to adenosine deaminase
complexing protein-2, and to the T-cell activation antigen CD26. It is an
intrinsic membrane glycoprotein and a serine exopeptidase that cleaves X-
proline dipeptides from the N-terminus of polypeptides.
Clone
SN0000-3G65
Isotype
IgG2
Immunogen
Mouse recombinant IGF1 protein
Hos... 阅读全帖
n***w
发帖数: 2405
18
来自主题: Biology版 - p-Stat3 antibody
Is this a pY705 STAT3?
It may be recognizing both serine and tyrosine phosphorylated stat3.
g*********9
发帖数: 3528
19
来自主题: Biology版 - p-Stat3 antibody
It is clearly stated on its website......
See background:
"Stat3 isoform expression appears to reflect biological function as the
relative expression levels of Stat3α (86 kDa) and Stat3β (79 kDa) depend
on cell type, ligand exposure, or cell maturation stage (10). It is notable
that Stat3β lacks the serine phosphorylation site within the carboxy-
terminal transcriptional activation domain (8)."
K*F
发帖数: 120
20
来自主题: Biology版 - 求文献一篇,谢谢
国内老师要一篇很老的文献,我们学校居然没有收录
网址
http://onlinelibrary.wiley.com/doi/10.1002/9780470122983.ch3/su
文献信息:
title:
Serine Hydroxymethyltransferase
Authors:
Alton Meister
LaVerne Schirch
Published Online: 22 NOV 2006
DOI: 10.1002/9780470122983.ch3
Copyright © 1982 John Wiley & Sons, Inc.
Book Title
Advances in Enzymology and Related Areas of Molecular Biology, Volume 53
请您转发 z******[email protected]
万分感谢!
w***7
发帖数: 1637
21
source:http://bbs.netbig.com/thread-2491712-1-2.html
看了一下,今年不错啊,和清华并驾齐驱。
而且下半年我知道的还有两篇NS。
~~~~~~~~~~~~~~~~~
1.
Yuan W, Wu T, Fu H, Dai C, Wu H, Liu N, Li X, Xu M, Zhang Z, Niu T, Han Z,
Chai J, Zhou XJ, Gao S, Zhu B
Dense Chromatin Activates Polycomb Repressive Complex 2 to Regulate H3
Lysine 27 Methylation
Science, DOI: 10.1126/science.1225237, Aug. 24, 2012
2.
Liu B, Du H, Rutkowski R, Gartner A, Wang X
LAAT-1 Is the Lysosomal Lysine/Arginine Transporter That Maintains Amino
Acid Homeostasis
S... 阅读全帖
s******y
发帖数: 28562
22
有啊。
Proc Natl Acad Sci U S A. 1995 Nov 21;92(24):11259-63.
Signal-induced degradation of I kappa B alpha requires site-specific
ubiquitination.
Scherer DC, Brockman JA, Chen Z, Maniatis T, Ballard DW.
Source
The inhibitor protein I kappa B alpha controls the nuclear import of the
transcription factor NF-kappa B. The inhibitory activity of I kappa B alpha
is regulated from the cytoplasmic compartment by signal-induced proteolysis.
Previous studies have shown that signal-dependent phosphorylation ... 阅读全帖
a*****x
发帖数: 901
23
不理解。。。哪个GPCR?

alpha
proteolysis.
serine
j*b
发帖数: 341
24
这个PKM2和肿瘤代谢的关系已经知道很久了,这两篇还不是原创贴。
cantley还可以发nature,能不能解释一下?
Anticancer Res. 2003 Mar-Apr;23(2A):1155-8.
Tumor marker pyruvate kinase type tumor M2 in patients suffering from
diabetic nephropathy.
Oremek GM, Rutner F, Sapoutzis N, Sauer-Eppel H.
Source
Central Laboratory, Hospital of the Johann Wolfgang Goethe-University,
Frankfurt/Main, Germany.
Abstract
INTRODUCTION:
Compared to normal tissues all tumors investigated so far and especially
those with a metastatic potential overexpress an isoenzy... 阅读全帖
j*b
发帖数: 341
25
这个PKM2和肿瘤代谢的关系已经知道很久了,这两篇还不是原创贴。
cantley还可以发nature,能不能解释一下?
Anticancer Res. 2003 Mar-Apr;23(2A):1155-8.
Tumor marker pyruvate kinase type tumor M2 in patients suffering from
diabetic nephropathy.
Oremek GM, Rutner F, Sapoutzis N, Sauer-Eppel H.
Source
Central Laboratory, Hospital of the Johann Wolfgang Goethe-University,
Frankfurt/Main, Germany.
Abstract
INTRODUCTION:
Compared to normal tissues all tumors investigated so far and especially
those with a metastatic potential overexpress an isoenzy... 阅读全帖
k******0
发帖数: 1073
26
CNS灌水大牛11g的文章应用率低得好像有些可怜,2009年的文章还被引用不到50,即使
2011,12的较新文章,引用率也很低。离国际大牛还远着。
1. [PDF] Serine/threonine phosphatases: mechanism through structure
Y Shi - Cell, 2009 - bio.ijs.si
Cited by 236
2. Structure and mechanism of an amino acid antiporter
…, L Zhou, S Dang, L Sun, X Li, J Wang, Y Shi - Science …, 2009 -
Cited by 84
3. Structural basis for sequence-specific recognition of DNA by TAL
effectors
Cited by 51
4. Structure of a presenilin family intramembrane aspartate protease
X Li, S Dang, C Yan,... 阅读全帖
k******0
发帖数: 1073
27
根据google scholar, CNS灌水大牛11g的文章应用率低得好像有些可怜,2009年的文
章还被引用不到50,即使2011,12的较新文章,引用率也很低。离国际大牛还远着。
1. [PDF] Serine/threonine phosphatases: mechanism through structure
Y Shi - Cell, 2009 - bio.ijs.si
Cited by 236
2. Structure and mechanism of an amino acid antiporter
…, L Zhou, S Dang, L Sun, X Li, J Wang, Y Shi - Science …, 2009 -
Cited by 84
3. Structural basis for sequence-specific recognition of DNA by TAL
effectors
Cited by 51
4. Structure of a presenilin family intramembrane aspartate protease
X ... 阅读全帖
i****g
发帖数: 3896
28
施一公近五年引用次数最高的文章就是这篇“Serine/Threonine Phosphatases:
Mechanism through Structure ”,Web of Science查询是186次,但这是一篇Review
,并非研究论文,讨论引用次数没有意义。
施一公近五年研究论文引用次数最高的是2009年的Science文章“Structure and
Mechanism of an Amino Acid Antiporter ”,仅68次。
谢晓亮2009年后引用次数最高的研究论文为2010年的Science文章“Quantifying E-
coli Proteome and Transcriptome with Single-Molecule Sensitivity in Single
Cells ”,为255次。
庄小威2009年后引用最高的研究论文是2010年的“Breaking the Diffraction Barrier
王晓东2009年后引用最高的研究论文是2009年的Cell“Receptor Interacting Protein
Kinase-3 De... 阅读全帖
k****n
发帖数: 158
29
来自主题: Biology版 - paper help (urgent)
please help for the paper below:
http://www.fasebj.org/content/28/9/3996.long
title:
Mannan-binding lectin-associated serine protease 2 is critical for the
development of renal ischemia reperfusion injury and mediates tissue injury
in the absence of complement C4
Thanks
l***y
发帖数: 4671
30
来自主题: Biology版 - 请教关于蛋白质的酶活性研究
如果是serine hydrolase 可以试试 ActivX 的这个 probe:
http://www.activxprobes.com/probes/serine_hydrolase.html

tag
x****n
发帖数: 893
31
in a study of mutations that reduce the activity of a cytoplasmic enzyme, a
mutation is found that results in substitution of an alanine residue for the
serine residue normally present at position 127 in the enzyme. This
mutation is most likely to reduce the activity of the enzyme by preventing
which of the following?
a. attachment of farnesyl group
b. attachment of n-linked oligosaccharides
c. formation of disulfide bonds
d. phosphorylation of the enzyme
e. targeting of the enzyme to the correc... 阅读全帖
c*******9
发帖数: 122
32
A is not right for sure.
I am thinking E: cause golgi adds 0-oligosaccharides to serine and threonine
.
Not sure
d*****x
发帖数: 96
33
Phosphorylation usually occurs on serine, threonine, and tyrosine residues
in eukaryotic proteins
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