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全部话题 - 话题: cran
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l****o
发帖数: 1238
1
来自主题: Hardware版 - 计算机法语#常用硬件#
poste de travail工作台;écran屏幕; carte graphique 显卡; souris 鼠标;
graveur 刻录机; cartouche d‘encre墨盒 etc
-
翻墙回国看国内视频youku土豆 www.baiduvpn.com
支持iphone ipad android
s**u
发帖数: 1436
2
来自主题: Linux版 - 服务器用啥 distro 好?
不都说了用ubuntu LTS么。
R, Matlab, Mathematica都没问题。
R可以直接用cran提供的repository,不用自己compile
s*r
发帖数: 2757
3
有一段时间mclust就是要交钱的
http://cran.r-project.org/web/packages/EMCC/LICENSE
但是现在似乎它主页上又是gpl2/gpl3了
l*********s
发帖数: 5409
n******7
发帖数: 12463
5
来自主题: Programming版 - matlab 和 R 的最大(根本)区别?
这个我不熟,等牛人来说说
matlab要是很容易利用上CPU和GPU的话,是个很大的plus
R随便搜了一下,也有不少包,不知道用起来如何
http://cran.r-project.org/web/views/HighPerformanceComputing.ht
m******r
发帖数: 1033
6
来自主题: Programming版 - data.table谁用过? 有那么神吗?
在学R. data.table号称只用1/10的内存,速度快10倍。 谁用过? 真有这么神吗?
外语不好,谁给看看这话什么意思? 是要我有100g的内存吗?
Fast aggregation of large data (e.g. 100GB in RAM), fast ordered joins, fast
add/modify/delete of columns by group using no copies at all, list columns,
a fast friendly file reader and parallel file writer.
--https://cran.r-project.org/web/packages/data.table/
i*********s
发帖数: 159
7
Fancy header package may do. Search at cran. Or check wiki latex book for
customizing title page.
★ Sent from iPhone App: iReader Mitbbs Lite 7.56
c*********t
发帖数: 340
8
cran.r-project.org/doc/contrib/Owen-TheRGuide.pdf
:)
l**********1
发帖数: 5204
9
来自主题: Biology版 - roc
first BAOZI one got
Merci.
next,
rocr is better than roc
within obscure several
quantities that are necessary for evaluating the operational
effectiveness of diagnostic tests.
please go to
HTTPS//stat.ethz.ch/pipermail/r-help/2009-February/187606.html
and
//rocr.bioinf.mpi-sb.mpg.de/
now rocc might be better than rocr
//cran.r-project.org/web/packages/rocc/rocc.pdf
Ps: if you satisfied with this answer BAOZI another one please transfer to my account.
only for asking one old paper pdf file.
detai... 阅读全帖
l**********1
发帖数: 5204
10
R code package:
Earlier
sma package:
FTP//ftp.auckland.ac.nz/pub/software/CRAN/doc/packages/sma.pdf
//www.stat.berkeley.edu/users/sandrine/Docs/Papers/springer02.Rnw
//statwww.epfl.ch/davison/teaching/Microarrays/lab/normalization_eda.html
later
limma package
//bioconductor.org/packages/2.6/bioc/vignettes/limma/inst/doc/usersguide.pdf
//rss.acs.unt.edu/Rdoc/library/limma/html/loessfit.html
ps: now almost using limma
please go to
//www.bioconductor.org/packages/release/bioc/vignettes/marray/inst/... 阅读全帖
l**********1
发帖数: 5204
11
R code package:
Earlier
sma package:
FTP//ftp.auckland.ac.nz/pub/software/CRAN/doc/packages/sma.pdf
//www.stat.berkeley.edu/users/sandrine/Docs/Papers/springer02.Rnw
//statwww.epfl.ch/davison/teaching/Microarrays/lab/normalization_eda.html
later
limma package
//bioconductor.org/packages/2.6/bioc/vignettes/limma/inst/doc/usersguide.pdf
//rss.acs.unt.edu/Rdoc/library/limma/html/loessfit.html
ps: now almost using limma
please go to
//www.bioconductor.org/packages/release/bioc/vignettes/marray/inst/... 阅读全帖
l**********1
发帖数: 5204
12
来自主题: Biology版 - 问个统计问题
pls try
//cran.r-project.org/web/packages/DTK/DTK.pdf
or refer this book
"Use R!
--Applied Statistical Genetics with R
For Population-based Association Studies"
by Andrea S. Foulkes
Springer Press (2009)
web link:
//taylor0.biology.ucla.edu/~bvonhold/R_files/UseR!.pdf
l**********1
发帖数: 5204
13
pls try R if you want to do rna-seq assembly more better
below online free books:
'An Introduction to R'
by Venables and Smith
//www.e-booksdirectory.com/details.php?ebook=1791
PDF link:
//cran.r-project.org/doc/manuals/R-intro.pdf
or
'R Graphics'
by Paul Murrell
//www.stat.auckland.ac.nz/~paul/RGraphics/rgraphics.html
PDF link:
//e-reading.by/bookreader.php/137370/C486x_APPa.pdf
BTW,
for Python pls refer below online Books:
Bioinformatics Programming Using Python (2009)
by O´Reilly
link... 阅读全帖
l**********1
发帖数: 5204
14
来自主题: Biology版 - 我该买什么软件?
Epi: A package for statistical analysis in epidemiology
http://bendixcarstensen.com/Epi/
References pls go to
http://cran.at.r-project.org/web/packages/Epi/citation.html
t****a
发帖数: 1212
15
来自主题: Biology版 - 水平表头
http://cran.r-project.org/web/packages/SortableHTMLTables/index
SortableHTMLTables writes a data frame to an HTML file that contains a
sortable table. The sorting is done using the jQuery plugin Tablesorter. The
appearance is controlled through a CSS file and several GIF's.
R对HTML这方面的支持实在是不足,或者说还比较落伍。
l**********1
发帖数: 5204
16
Alternatively, you can try
i) Proteomics Array,
last month One paper,
http://www.nature.com/nmeth/journal/v10/n11/full/nmeth.2707.htm
ii)
RPPA Protein mluti antibody Array system,
http://rppa2013.com/program.html

iii)
Master Antibody Microarray
for quantitive Western Blotting,
http://www.nature.com/marketplace/2013/10/microarrays-2/
ps:
Relevant R package manual book link,
HTTP double dot//cran.r-project.org/web/packages/RPPanalyzer/vignettes/
RPPanalyzer.pdf
d********O
发帖数: 1196
17
Title: Metal-Carbohydrate Complexes in Solution
Journal: Progress in Inorganic Chemistry
Author: Jean-Franqois Verchere, Stella Chapelle, Feibo Xin, and Debbie C.
Crans,
year: 1998 vol. 47 page: 837-945
Please send to D********[email protected], if it is more convenient for you.
Thanks again and Happy new year!
B****n
发帖数: 11290
18
来自主题: Mathematics版 - 如何同时fit两条相近的lines?
I am not sure I totally understand your question. It seems that you need to
find a change point between these two lines and estimate the coefficients p,
q, a,b.
If this is what you want, there are bunch of methods dealing with it. For
example, you can use the segmented regression package to do it; below is the
link for the segmented package using free software R.
http://cran.r-project.org/web/packages/segmented/segmented.pdf
w**********y
发帖数: 1691
19
There are lots of packages can do this.
like 'distr'.
Instruction is here: http://cran.r-project.org/web/packages/distr/distr.pdf
You can install this packages by:
install.packages('distr');
library(distr)
R*****n
发帖数: 8658
20
来自主题: Science版 - Re: 求S-Plus软件
you can use R instead
it is free and better than Splus
and it is almost the same as Splus but with better management of memory
here is the link:
http://lib.stat.cmu.edu/R/CRAN/
h******a
发帖数: 198
21
来自主题: Statistics版 - Re: 请教学习R从哪里入手啊?
链接坏了
cran.r-project.org/doc/contrib/Faraway-PRA.pdf
f******a
发帖数: 9
22
来自主题: Statistics版 - R 1.8.0 available
Comprehensive R Archive Network
http://cran.r-project.org/mirrors.html
jl
发帖数: 398
g********5
发帖数: 62
24
来自主题: Statistics版 - please help for the R code
you probably need to study "Introduction to R":
http://cran.r-project.org/doc/manuals/R-intro.pdf
BTW, you can try following code:
aa=matrix(c(1:4),2,2)
aa
beta<-matrix(0,1,2)
for (k in 1:2){
beta[k]=sum(aa[k,]*sum(aa[,1]*aa[,1]))
}
beta
F****r
发帖数: 151
25
来自主题: Statistics版 - about R function to do N!
something from R-help
There is the factorial() function in the gregmisc package on CRAN,
otherwise the gamma() function as has been mentioned.
A*****n
发帖数: 243
26
来自主题: Statistics版 - R 再请教
因为stats是R自带的吧。可以直接看R的源代码
比如最新的R2.8.0就是http://cran.r-project.org/src/base/R-2/R-2.8.0.tar.gz

get
t*****9
发帖数: 19
27
Hi, you may find this helpful. There are codes for K-M estimate of survial
function. and the Cox model.
http://cran.r-project.org/doc/contrib/Fox-Companion/appendix-cox-regression.pdf
t**g
发帖数: 1164
28
小弟是用的window下的R
cran上有个R package
之提供了mac os下的binary
没有window下的
我下载了源文件
请问如何在window里的R下面使用它?多谢!
s*r
发帖数: 2757
A*****n
发帖数: 243
30
来自主题: Statistics版 - How to do ROC curve in R?
install the ROCR package fom CRAN
D******n
发帖数: 2836
31
来自主题: Statistics版 - new R is released
check out the R website
http://cran.r-project.org/src/base/NEWS
S******y
发帖数: 1123
32
来自主题: Statistics版 - problem in Building R package
i am trying to build an R package and submit to CRAN.
i am using -
package.skeleton(name="xxzz", code_files = "H:\xxzz.R")
to build package xxzz.
z**k
发帖数: 378
w*****e
发帖数: 806
S******y
发帖数: 1123
35
来自主题: Statistics版 - How do build an R package for internal use?
We have developed a number of R functions for internal use only (industry
specific).
Is there a way we can build an R package for internal use only (i.e. without
submitting to CRAN)? but internal users can still download zip file and
install it on their R on windows?
Thanks.
S******y
发帖数: 1123
s****e
发帖数: 1180
a*****5
发帖数: 168
38
来自主题: Statistics版 - 请推荐R的初学/入门教程
"An Introduction to R" is recommended. It can be downloaded at:
http://cran.r-project.org/doc/manuals/R-intro.pdf
z**k
发帖数: 378
39
这个叫做Genetic function,我记得好象是S Language里就有定义的吧(具体记不清楚
了),
有一点点类似C++里面的virtual function,根据不同的object类型来调用不同的函数。同样
类似的
函数还有predict,print等等,你看一下源代码,那个NAMESPACE文件,应该有个
S3method的
函数吧,读一下S3method的CRAN手册就应该清楚了。
其实道理很简单,就是让predict对不同的object调用不同的函数,当你的input是一个
lm的
object的时候,predict就变成了predict.lm,当你的object是glm的时候,predict就
变成
了predict.glm,以此类推。因为绝大多数统计模型都需要做预测,利用Genetic
Function就不
再需要根据不同的object来命名预测函数。
R里面这样的函数很多,几乎每一个package都会用到,你可以写一个简单的package实
现一下
default print功能就了解了。
p**********l
发帖数: 1160
40
来自主题: Statistics版 - 想开始学R,怎么入手?
An Introduction to R
for beginners
http://cran.r-project.org/doc/manuals/R-intro.pdf
z**k
发帖数: 378
41
来自主题: Statistics版 - 请问怎么查看R里面函数用的C程序
去CRAN下载Package source
s*******2
发帖数: 499
42
来自主题: Statistics版 - 请问怎么查看R里面函数用的C程序
谢谢。
我想看的函数在package stats里,可是奇怪的是在CRAN我却没有看到这个package.
请问是点击主页左边的Software--packages吗?
z**k
发帖数: 378
43
来自主题: Statistics版 - 请问怎么查看R里面函数用的C程序
stats is R's core lib, u need to look at the R source
http://cran.cnr.berkeley.edu/ download "R-2.11.1.tar.gz"
S******y
发帖数: 1123
44
'mpinv' is included in an R package I wrote, which is available to download
from CRAN.
b*******x
发帖数: 100
45
请问你使用的是RGtk还是RGtk2?。。4年前不好说,R基本日新月异,Michael他们在写
一本R中GUI
开发的新书,explorase使用RGtk2,不是gWidgets开发的,是比较好的典范。当然可以
用其他语言
写,但是现在的Gtk和Qt的API基本是全功能的了,而且源于R的便于开发R里面的GUI,
保持了代码的
一致。
把他跟perl比,比把他跟SAS比合适多了。perl开源,脚本语言,有cpan,R开源免费,
脚本语言,免
费,有cran,而且他的交互式的操作又和python挺像的。这些语言语法上都和c类似,
都可以面向对象
的编程。而且R,perl,python很多时候都是粘合性的语言,粘合C,java,C++或者其他
其他语言。
易用性是脚本语言的特点。固然,perl跟python用户群非常之大,也许这么比较他们不
大乐意,但是
从语言的角度上,设计角度上,这种相似不能否认啊啊
b*******x
发帖数: 100
46
这个帖子挺有趣的,我还真不知道incanter,有时间看看去,更有意思的是我现在知道
R.Ihaka跟
D.T.lang在干什么了。。。。
btw:R可以平行运算。
http://cran.r-project.org/web/views/HighPerformanceComputing.html

在发展运行于.NET虚拟机上的版本)的一种现代的Lisp。clojure在2007年问世,发展迅
速,现在
已经发布到了1.2版本。clojure的主要优势是对并行计算的天然支持,与虚拟机的宿主
语言的无缝
结合,当然还有Lisp的语言优势。
clojure
NET
o****o
发帖数: 8077
47
来自主题: Statistics版 - 可有用C++的同志?
就是奔腾mobile.R对应不同的CPU有多个基于ATLAS的RBLAS.DLL
http://cran.r-project.org/bin/windows/contrib/ATLAS/】。现在提供了给C2D编译的新RBLAS.DLL,更快一些。我把这个新的跟原来用的给老CPU的比较了一下, C2D的比原配在解SVD上快一倍:
原配 (R version 2.8.1)
> x<-matrix(rnorm(1000^2), ncol=1000)
> system.time(y<-svd(x))
用户 系统 流逝
8.42 0.05 8.50
>
###################
P3/P2:
> x<-matrix(rnorm(1000^2), ncol=1000)
> system.time(y<-svd(x))
用户 系统 流逝
6.50 0.11 6.69
>
###################
P4:
> x<-matrix(rnorm(1000^2), ncol=1000)
> system.time(y<-svd(x))
用户 系统 流逝
6.21 0.07 6.
f***a
发帖数: 329
48
second this
编程好,数理强,何必去药厂呢?
btw,楼主说得写过3 4个R packages是指already submitted to CRAN的?

will be interested in quant position on the wall street?
m**********4
发帖数: 774
49
我看药厂轻松工资高,所以一直想去。不过人家都不要我。今年准备改投IT类公司了。
对,r package是已经被CRAN PUBLISH了的。
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