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全部话题 - 话题: structures
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n***w
发帖数: 2405
1
乍一看还以为是choroidal neovascularization.
心想,这咋和genome structural variation联系上。。。lol
u*********1
发帖数: 2518
2
我倒不一定想做science
只是觉得这涉及很多的sequencing/genomics/bioinformatics,一方面很有趣;另外好
像找工作(不管是学校还是industry)是不是比较有前景?
所以想接受这方面(sequencing/bioinformatics)的训练
另外我在烂校,老板MD-PHD的AP;但老板的老板是超级大牛
按照你的说法,什么方向都是人满为患,大家都不用做了。
而且我读了一些paper,现在published的各种疾病的whole-genome structural
variants的研究,比较靠谱的结果还仅仅是基于array CGH的成果;而不是next-gen sequencing,因为一方面next-gen sequencing还是比较贵的,做不了大规模;另外基于sequencing data的各种鉴定软件的结果根本都自相矛盾,还需要软件进一步的开发当然更重要的是测序技术本身的发展(比如更大的read length)
当然了,我上面说的估计牛人们早开始谋划了,只不过还没publish出来
个人想法,说的不对请指正

的AP faculty了。俺们... 阅读全帖
t**m
发帖数: 158
3
structrual biology 入门,
推荐"Introduction to protein structure" by Carl Branden & John Tooze

site
h*********c
发帖数: 78
4
protein structure and function, 灰色封皮的,非常适合新手入门
i***l
发帖数: 1656
5
来自主题: Biology版 - Protein Crystal structure service
no biggie
clastal W to align
Modeler for molecular replacement, as long as you have known structure as
the "template"
Pymol to present
done
t**l
发帖数: 109
6
才5-6左右。跟其他的CNS子刊不是一个档次的。是不是好的structure paper都发到CNS
或者其他能沾边的子刊上了。
c**********n
发帖数: 177
7
做结构的大部分实验室也不可能随便就发很大文章吧。大牛实验室是年年都有CNS,小
牛实验室估计是几年有个CNS,剩余的实验室(大多数)其实就是发PNAS,structure,
JBC,JMB,biochem。所以说其实所有分支都差不多吧,没有谁好发文章或者谁不好发。
施一公,颜宁这次确实是手慢了。Anyway,总不能啥结构都被他俩抢走吧。。。

science
U**l
发帖数: 153
8
Rosetta第一步也是基于PDB database的homology modeling,然后再用force field做
计算。Rosetta近年在蛋白计算届几乎是最火的软件,发了大量文献,baker组资源强大
,当然宣传也做得很好。
不过确实需要些基础Linux知识安装很运行,以及一台还可以的机子(记得以前组里的
人试过,12 core 的机子跑3-5天,from sequence to refined structure)。网上资料
现在做得应该更完善了,记得还有Robetta web server 应该是可以帮你

★ 发自iPhone App: ChineseWeb 8.7
j****x
发帖数: 1704
9
你说的对,Resetta后来也推出了基于Homology modelling的模块,不单单只靠ab
initio presiction的算法,但和传统意义上的homology modelling经典方法还是有所
区别的。
Baker的牛文确实层出不穷,他提出的这套方法原创性太强,基本上这个领域就看他一
个人在做,所谓“走自己的路,让别人无路可走”。
如果我没记错,近几次CASP的结果,rosetta基本都比不上I-Tasser(或大致持平?)
,等今年CASP11的结果出来再看。前面提到过,其实rosetta眼下的亮点和强项,在
structure refinement以及protein design上,这一块确实没有敌手,尤其是后者,让
Resatta大热。但眼前为数不多的几个成功范例能否再进一步推广,有多少普遍意义,
可能还不好说。
Robetta server基本就是个joke,你可以试一下普通权限在线提交一个>100aa的序列,
看看系统计算出来大约需要多久能给你结果...而Rosetta的帮助文档做的是出了名的烂
,这么久以来一直就没变过...
r**********e
发帖数: 587
10
看到一堆whole-genome sequencing寻找structural variation的文章,但大部分的都
是methodology;然后1000genome测了几千个正常人的SV
但我搜了半天都几乎没看到有什么具体的disease(貌似有几个cancer tumor的),说
某个病通过WGS寻找到新的SV的。(已知SV然后验证的不算)
或许是我搜索能力太差?
谢谢
h*****b
发帖数: 492
11
来自主题: Biology版 - Structural biology Opening at PacBio
我们组想找个做 polymerase modeling的,postdoc经验有最好,但不required. 如果
感兴趣的话,可以把简历发到[email protected]/* */
Here is the job description
Scientist, Structural Biology
Location: Headquarters - Menlo Park, CA USA
Job Code: 1562
# of openings: 1
Description
Pacific Biosciences is seeking a highly motivated macromolecular modeler.
The candidate will work within an interdisciplinary team to model
macromolecular complexes, enzyme variants and their interactions with
nucleotide analogs. The candidate ... 阅读全帖
m*******s
发帖数: 3142
12
【 以下文字转载自 Physics 讨论区 】
发信人: slowfish (catCat), 信区: Physics
标 题: 求本书:The Embedding Method for Electronic Structure
发信站: BBS 未名空间站 (Mon Jan 2 09:17:33 2017, 美东)
http://iopscience.iop.org/book/978-0-7503-1042-0
学校图书馆么订,哪位大神可以下下来的,请发至: [email protected]/* */
感激不尽~~~
l*****m
发帖数: 98
13
Hi,
I am a protein biochemist and furthermore structural biologist. I have long
experience in protein biochemistry, biophysics, and crystallography. I am
very interested in the position. Can you please let me know how I can apply
for the position? My email is [email protected]
Thanks.
s******o
发帖数: 1
14
来自主题: Business版 - business structure question
If i have china investor/partner and i will be the manager/partner for
business activities in the us. What kind of business structure is better?
Limited partnership or LLC or c corp.? Business may involve real estate
asset holdings/management and import/export. Thanks!
s*******2
发帖数: 47
15
请哪位大侠帮忙找一下这篇文献: Journal of biomolecular structure & dynamics

1994,12:355–366. 万分感谢~!
m******m
发帖数: 13
16
A postdoctoral research position funded by a four-year NIH grant is
immediately available in Dr. Jianlin Cheng's group in the Department of
Computer Science and Informatics Institute at the University of Missouri,
Columbia. The scientist at this position will work on a project to design,
develop, and benchmark cutting-edge computational methods and tools to
predict protein structures from protein sequences. The methods and tools
will be tested in the biannual world wide Critical Assessment of Te
S*********h
发帖数: 61
17
Based on some literatures, the Raman peak width is related to crystal
structure. But what is the theory basis for this? any body have any ideas
about this? thank you very much.
If you know some big niu guy, please let me know .
Thanks
v*****s
发帖数: 20290
18
generally speaking, the peak width is inversely proportional to the life
time of the vibrational excited state. So my guess is that the crystal
structure will affect the coupling between neighbor molecules and thus
change the life time.

ideas
w**********n
发帖数: 90
19
Mmolecular electronic-structure theory by Trygave Helgaker/Poul Jorgensen/
Jeppe Olsen这本书的电子版
Thanks!
J*******3
发帖数: 1651
20
Terribly sorry. It is : Richard Martin: Electronic Structure: Basic Theory
and Practical Methods (Vol 1)
Thank you very much!
x*******i
发帖数: 32
21
Hello there:
Trytophan fluorescence spectroscopy could be used to analyze whether protein
is compact or open. Ex at 288 nm and em around 320 nm suggests that protein
is compact (trytophan in hydrophobic environment). Em at longer wavelength
suggests an open structure. Also relative fluorescence intensity could tell
something? Anybody know why?
Thanks
h***o
发帖数: 350
22
来自主题: Chemistry版 - paper help (Journal of Molecular Structure)
Lattice vibration spectra. Part LXXXII. Brucite-type hydroxides M(OH)2 (M =
Ca, Mn, Co, Fe, Cd) — IR and Raman spectra, neutron diffraction of Fe(OH)2
H.D. Lutz
H. Möller,
M. Schmidt
Journal of Molecular Structure
Volume 328, 1 December 1994, Pages 121–132
Thank you very much.
m*******s
发帖数: 3142
23
【 以下文字转载自 Physics 讨论区 】
发信人: slowfish (catCat), 信区: Physics
标 题: 求本书:The Embedding Method for Electronic Structure
发信站: BBS 未名空间站 (Mon Jan 2 09:17:33 2017, 美东)
http://iopscience.iop.org/book/978-0-7503-1042-0
学校图书馆么订,哪位大神可以下下来的,请发至: [email protected]/* */
感激不尽~~~
Z**X
发帖数: 366
24
来自主题: CivilEngineering版 - 问个PE/Structural的问题
如果你说的是 Civil PE下午的structural depth,那么不需要深入的wood知识。
去年考的时候只有一两个简单的题目,直接把数据代进规范的公式就完事了。
b*******g
发帖数: 1095
25
来自主题: CivilEngineering版 - 问个PE/Structural的问题
谢谢!我说的就是Civil PE下午的structural depth。请问我需不需要买个NDS规范?
或者您说的规范的公式在PPI的那本书里就都有了?
还有,PPI那本书是基于1998 revisins to 1997 NDS。是不是太老了?
j********9
发帖数: 162
26
来自主题: CivilEngineering版 - 问个PE/Structural的问题
If PE/Civil/Structural Module, wood question will be very minor. If you don'
t have enough time, it is even okay to give it up as per my experience. But
you need to review the rest like loading, steel and concrete very well.
b*******g
发帖数: 1095
27
来自主题: CivilEngineering版 - Structural I 考试指南
赞!能否写个PE/Structural depth的考试指南?
Z**X
发帖数: 366
28
do not waste time and money for getting phd (structure).
t**********9
发帖数: 10
29
来自主题: CivilEngineering版 - 纽约的 structural engineering job
Definitely, you are right.
The average salary for the new graduate structural engineer is around 55k.
But some firms with industrial project or some manufacturing companies
provide higher salary.
It depends on your personal career goal.
b**z
发帖数: 7
30
来自主题: CivilEngineering版 - 接下来几年structure的是不是前景光明啊?
这次桥塌事件,好像会使得未来几年大量的资金涌入基础设施翻修,是不是structure工
作会好找?
x********3
发帖数: 566
31
来自主题: CivilEngineering版 - 接下来几年structure的是不是前景光明啊?
没错。新闻已经说了。

structure工
s*****y
发帖数: 97
32
帮一个朋友贴的:
A TA/RA position supervised by Assistant Professor Ying Tian is available
from
Spring 2008. His research addresses both analytical and experimental
investigations of reinforced concrete (RC) structural systems and components.
The position will be awarded to a candidate who wants to pursue a PhD in
Civil
Engineering and has research interest in at least one of the following
topics:
(1) shear strength evaluation and design; (2) progressive collapse
prevention
and retrofit; (3) smart RC me
t******o
发帖数: 467
33
It depends how good you are.
I heard somebody (civil structural, PhD, EIT) 45K only in Los Angeles. In
the mean time, I know another guy(also PHD and EIT) over 70K in LA.
h**h
发帖数: 55
34
I saw a available position in seattle area about 2 weeks ago.It is
structural Engineer required high-rise building experience.The salary is 70k
to 110k. You may do research on Monster.
Good Luck!
n******c
发帖数: 60
35
Structural Engineering, Ph.D毕业,在西雅图工作一年,主要做wharf, bridge,
Tunnelde 设计,想换一个工作,building,bridge,waterfront等都可以,有没有位
置空缺?
b******r
发帖数: 11
36
来自主题: CivilEngineering版 - Re: Opening for Structural Engineering position in SF
Hi, yyllstr,
My friend is a structural engineer and has worked in China for 7 yrs and a
half now. BS. Is it possible for him to apply for this job in your company?
Thank you very much for your time.
Brighter
b******r
发帖数: 11
37
来自主题: CivilEngineering版 - Re: Opening for Structural Engineering position in SF
My friend is a structural engineer and has worked in China for 7 yrs and a
half now. BS. Is it possible for him to apply for some jobs in your company?
Thank you very much for your time.
Brighter
s******7
发帖数: 38
38
I am a Ph.D of civil engineering focusing on structure. I have one year
working experience and excellent English communication skill. If anybody
knows any job opening, would you please inform me? Appreciate.
By the way, I am holding H1 Visa now.
y***n
发帖数: 175
39
My company (a TOP 25 transportation firm in US) is hiring several structural
/geotechnical/civil/mechanical engineers for a new project.
The requirements are as below:
1. a preference for PE registration.
2. if you are not a PE, an alternate of 6-10 years of design experience is
acceptable.
if you are interested, please email you resume to s*****[email protected].
y****o
发帖数: 131
40
某猎头公司为一在Rockville, MD 的公司寻找
具有concrete repair, structural restoration 经验的人,
最好有硕士或博士学位
如有兴趣,给我站内头条,我可以把猎头的电话号码给你
H******e
发帖数: 276
41
我只是好奇为什么我们学校的strucutral engineering in CE (top 10)一个中国人
都没有。我不是CE的,打算往CE转。打听了一圈,一个中国人在CE读structural的都没
有(别的area的倒是很多)。
我只是想知道strucuture有什么特殊行么?(对于外国人)还是我们学校是个特例。或
者只是碰巧没人申请?!(不会吧)
t******o
发帖数: 467
42
For structural field, 申请奖学金相对难度大。因为本身的funding比其它方向少很
多。例如交通,大把大把的研究项目,自然招的学生尤其是外国学生就多。
H******e
发帖数: 276
43
我有MS degree, 打算申请structural in CE 会不会容易点?
c*****l
发帖数: 5203
44
本人STRUCTUR的 找工作好找 转吧
h****t
发帖数: 127
45
就快毕业了,想找DESIGN的工作,最好能去大公司。请问哪儿能找到这些设计公司的排
名?我是STRUCTURE方向的,BRIDGE DESIGN最适合。
请知道的朋友帮忙,谢谢先。
y*****o
发帖数: 17
46
I got a new offer. The position is for F level structural Engineering
professional. What does it mean for F level?
Is it senior engineer? Is it project engineer? Thanks.
H******e
发帖数: 276
47
有在 PSU AE 或者 CEE (structure) 的师兄师姐么?请站内短消息我,有个问题想
请教一下
c*m
发帖数: 10
48
来自主题: CivilEngineering版 - salary range ?- 加州structural software developer
My BF is having an interview soon for the above position and would really
apprieciate any advice on this.
His background is
PhD in structural engineering
post graduate expereince 7 years
current position: senior engineer with a major civil consulting engineering
company in the UK
Based in the UK, we don't really have a clue what sort of salary we could
expect. Any adivice?
J****7
发帖数: 375
49
来自主题: CivilEngineering版 - salary range ?- 加州structural software developer
CA也就那么几个公司做structural software,你自己查查myvisajobs就知道了。
一般在70K出头,可以要到80k.
但是senior engineer 干这个不值得。
b********a
发帖数: 270
50
来自主题: CivilEngineering版 - 不知道现在structural哪块还好找工作
做private的设计公司算不行了,public据说国家拨款了,慢慢会好起来
石油?能源?我知道有些公司还在找offshore structural的,不过以前没有做过,不
知道容不容易上手。。。
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